FreeSurfer是一个用于分析和可视化横截面或纵向研究的结构和功能神经成像数据的软件包。它是由Athinoula A.Martinos生物医学成像中心的计算神经成像实验室开发的。FreeSurfer是人体连接体项目首选的结构MRI分析软件。

FreeSurfer is a brain imaging software package developed by the Athinoula A. Martinos Center for Biomedical Imaging at Massachusetts General Hospital for analyzing magnetic resonance imaging (MRI) scan data. It is an important tool in functional brain mapping and facilitates the visualization of the functional regions of the highly folded cerebral cortex. It contains tools to conduct both volume based and surface based analysis, which primarily use the white matter surface. FreeSurfer includes tools for the reconstruction of topologically correct and geometrically accurate models of both the gray/white and pial surfaces, for measuring cortical thickness, surface area and folding, and for computing inter-subject registration based on the pattern of cortical folds. In addition, an automated labeling of 35 non-cortical regions is included in the package.

What is FreeSurfer?

FreeSurfer is an open source package for the analysis and visualization of structural, functional, and diffusion neuroimaging data from cross-sectional and longitudinal studies. It is developed by the Laboratory for Computational Neuroimaging at the Athinoula A. Martinos Center for Biomedical Imaging.

What does it include?

A full processing stream for MR imaging data that involves skull-stripping, bias field correction, registration, and anatomical segmentation as well as cortical surface reconstruction, registration, and parcellation. FreeSurfer also includes fMRI and diffusion tractography toolboxes, a robust visualization interface, utilities for statistical group analysis, and much more…

开源脑成像 MRI 软件 FreeSurfer v7.4.0(May 2023)(图1)

An open source software suite for processing and analyzing (human) brain MRI images.

  • Skullstripping
  • Image Registration
  • Subcortical Segmentation
  • Cortical Surface Reconstruction
  • Cortical Segmentation
  • Cortical Thickness Estimation
  • Longitudinal Processing
  • fMRI Analysis
  • Tractography
  • FreeView Visualization GUI
  • and much more…

官方网站:https://www.freesurfer.net
下载地址:https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferWiki

下载地址

开源脑成像 MRI 软件 FreeSurfer v7.4.0(May 2023)

百度网盘:https://pan.baidu.com/s/1s-HSKurs1xiE2l9NGcelHA?pwd=x416
123云盘:https://www.123pan.com/s/PjcA-cNNRA.html
夸克云盘:https://pan.quark.cn/s/9022c3de9ade

FreeSurfer v7.4.0(May 2023) 官方下载
https://surfer.nmr.mgh.harvard.edu/fswiki/rel7downloads

Linux OS: CentOS7, CentOS8, Ubuntu18, Ubuntu20, Ubuntu22
Mac OS: 10.15; 11.X, 12.X, 13.X (Intel binaries only running under Rosetta).

OS

Build Platform

Version

Release Date

Download

Size

MD5 sum

 

Linux

CentOS 7 x86_64 (64b) tar archive

7.4.0 release

May 2023

freesurfer-linux-centos7_x86_64-7.4.0.tar.gz

8.9G

40db9599e07216c3619feff8015a77a9

 

Linux

CentOS 7 x86_64 (64b) RPM installer

7.4.0 release

May 2023

freesurfer-CentOS7-7.4.0-1.x86_64.rpm

7.2G

901592522126ebf439917dd5903e67cc

 

Linux

CentOS 8 x86_64 (64b) tar archive

7.4.0 release

May 2023

freesurfer-linux-centos8_x86_64-7.4.0.tar.gz

8.9G

f0a443eaf47921eb4777a3d34be16a6b

 

Linux

CentOS 8 x86_64 (64b) RPM installer

7.4.0 release

May 2023

freesurfer-CentOS8-7.4.0-1.x86_64.rpm

7.2G

b5e83b7d1fa552772bb4fcc8bea0650e

 

Linux

Ubuntu 18 amd64 (64b) tar archive

7.4.0 release

May 2023

freesurfer-linux-ubuntu18_amd64-7.4.0.tar.gz

8.9G

49e8a09b9bd79cd297d9ac028dd33511

 

Linux

Ubuntu 18 amd64 (64b) DEB installer

7.4.0 release

May 2023

freesurfer_ubuntu18-7.4.0_amd64.deb

6.3G

c937619102bb6666c64c30c7f98802ae

 

Linux

Ubuntu 20 amd64 (64b) tar archive

7.4.0 release

May 2023

freesurfer-linux-ubuntu20_amd64-7.4.0.tar.gz

8.9G

301bf34eb65532aa8824da48cc13c956

 

Linux

Ubuntu 20 amd64 (64b) DEB installer

7.4.0 release

May 2023

freesurfer_ubuntu20-7.4.0_amd64.deb

6.3G

1f107c22eb75821e1aa46b55a6eb8189

 

Linux

Ubuntu 22 amd64 (64b) tar archive *

7.4.0 release

May 2023

freesurfer-linux-ubuntu22_amd64-7.4.0.tar.gz

8.9G

4ac13f71bbff55a39cf4960e65c59de7

 

Linux

Ubuntu 22 amd64 (64b) DEB installer *

7.4.0 release

May 2023

freesurfer_ubuntu22-7.4.0_amd64.deb

6.6G

b405e9ac2492ebe3c34d10a3fbf56ab8

 

MacOS

MacOS X darwin (64b) tar archive **

7.4.0 release

May 2023

freesurfer-darwin-macOS-7.4.0.tar.gz

6.6G

212a5d3b208de8a699d31318dca2e85b

 

MacOS

MacOS X darwin (64b) PKG installer **

7.4.0 release

May 2023

freesurfer-darwin-macOS-7.4.0.pkg

6.6G

157b2bfb9dbabe924f2f1a117e0bfe8e

Ubuntu 22 users may be prompted to obtain a new freesurfer license because of glibc updates
** Mac users should download and install the Xquartz 2.8.2 release from https://www.xquartz.org